Taxonomy: Difference between revisions
From wikiluntti
| Line 213: | Line 213: | ||
"type": "formula", | "type": "formula", | ||
"field": "ff_node_label", | "field": "ff_node_label", | ||
"expr": "if(datum.layout_depth == 0, 'Kantasienet', if(datum.layout_depth == 1, datum.A, if(datum.layout_depth == 2, datum.B, if(datum.layout_depth == 3, datum.C, if(datum.layout_depth == 4, datum.D, if(datum.layout_depth == 5, datum.E , '')))))" | "expr": "if(datum.layout_depth == 0, 'Kantasienet', if(datum.layout_depth == 1, datum.A, if(datum.layout_depth == 2, datum.B, if(datum.layout_depth == 3, datum.C, if(datum.layout_depth == 4, datum.D, if(datum.layout_depth == 5, datum.E , ''))))))" | ||
} | } | ||
] | ] | ||
Revision as of 11:04, 15 June 2021
Eliökunta
Vain muutama suku/ kaari on kirjoitettu tähän.
<graph> {
"width": 1024,
"height": 150,
"background": "#ffffff",
"data": [
{
"name": "tree",
"values": [
{"A": "Bakteerit","B": "Aktinobakteerit"},
{"A": "Bakteerit","B": "Bakteroidit" },
{"A": "Bakteerit","B": "Syanobakteerit" },
{"A": "Bakteerit","B": "Firmikuutit" },
{"A": "Bakteerit","B": "Proteobakteerit" },
{"A": "Alkueliöt (protoktistit)" },
{"A": "Sienet","B": "Kotelosienet","C": "Rihmastolliset kotelosienet" },
{"A": "Sienet","B": "Kotelosienet","C": "Aitohiivat" },
{"A": "Sienet","B": "Kotelosienet","C": "Taphrinomycotina" },
{"A": "Sienet","B": "Kantasienet","C": "Avokantaiset" },
{"A": "Sienet","B": "Kantasienet","C": "Ruostesienet" },
{"A": "Sienet","B": "Kantasienet","C": "Nokisienet" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Chytridiomycetes" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Mesochytriomycetes" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Monoblepharidomycetes" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Hyaloraphidiomycetes" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Sanchytriomycetes" },
{"A": "Sienet","B": "Pötsisienet","C": "Anaeromyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Buwchfawromyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Caecomyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Cyllamyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Neocallimastix" },
{"A": "Sienet","B": "Pötsisienet","C": "Oontomyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Orpinomyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Pecoramyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Piromyces" },
{"A": "Sienet","B": "Itusienet","C": "Physodermatomycetes" },
{"A": "Sienet","B": "Itusienet","C": "Blastocladiomycetes" },
{"A": "Sienet","B": "Harppuunasienet","C": "" },
{"A": "Kasvit","B": "Versokasvit","C": "Sammalet" },
{"A": "Kasvit","B": "Versokasvit","C": "Polysporangiophyta" },
{"A": "Kasvit","B": "Versokasvit","C": "Putkilokasvit" },
{"A": "Kasvit","B": "Vihreät kasvit","C": "Varsinaset viherlevät" },
{"A": "Kasvit","B": "Vihreät kasvit","C": "Näkinpartaislevät" },
{"A": "Kasvit","B": "Vihreät kasvit","C": "Streptophytina" },
{"A": "Kasvit","B": "Archeaplastida","C": "Viherlevät" },
{"A": "Kasvit","B": "Archeaplastida","C": "Punalevät" },
{"A": "Kasvit","B": "Archeaplastida","C": "Glaukofyytit" },
{"A": "Eläimet","B": "Sienieläimet","C": "" },
{"A": "Eläimet","B": "Monisoluiset","C": "Polttiaiseläimet" },
{"A": "Eläimet","B": "Monisoluiset","C": "Kampamaneetti" },
{"A": "Eläimet","B": "Monisoluiset","C": "Laakkoeläimet" },
{"A": "Eläimet","B": "Monisoluiset","C": "Kaksikylkiset" },
],
"transform": [
{
"type": "treeify",
"groupby": ["A","B"]
},
{
"type": "hierarchy",
"mode": "cluster",
"nodesize": [20,100]
},
{
"type": "formula",
"field": "align",
"expr": "'right'"
},
{
"type": "formula",
"field": "offset",
"expr": "-10"
}
]
}
],
"marks": [
{
"type": "path",
"from": {
"data": "tree",
"transform": [
{"type": "filter","test": "datum.parent"},
{
"type": "linkpath",
"sourceX": "parent.layout_y",
"sourceY": "parent.layout_x",
"targetX": "layout_y",
"targetY": "layout_x",
"shape": "cornerX"
}
]
},
"properties": {
"enter": {
"path": {"field": "layout_path"},
"strokeWidth": {"value": 2},
"stroke": {"value": "#000000"}
}
}
},
{
"type": "text",
"from": {
"data": "tree",
"transform": [
{
"type": "formula",
"field": "ff_node_label",
"expr": "if(datum.layout_depth == 0, 'Eliökunta', if(datum.layout_depth == 1, datum.A, if(datum.layout_depth == 2, datum.B, if(datum.layout_depth == 3, datum.C, ))))"
}
]
},
"properties": {
"enter": {
"x": {"field": "layout_y"},
"dx": {"field": "offset"},
"y": {"field": "layout_x"},
"dy": {"value": -8},
"font": {"value": "Arial"},
"fontSize": {"value": 12},
"align": {"field": "align"},
"baseline": {"value": "middle"},
"fill": {"value": "#0000ff"},
"text": {"field": "ff_node_label"}
}
}
}
]
} </graph>
Sienet
Lisätään sienten kuntaan tuttuja sieniä.
Kantasienet
<graph> {
"width": 1024,
"height": 150,
"background": "#ffffff",
"data": [
{
"name": "tree",
"values": [
{"A": "Sienet","B": "Kotelosienet","C": "Rihmastolliset kotelosienet", "D": "aaa", "E": "bbb" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Chytridiomycetes", "D": "aaa", "E": "bbb" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Mesochytriomycetes", "D": "aaa", "E": "bbb" },
{"A": "Sienet","B": "Pötsisienet","C": "Anaeromyces", "D": "aaa", "E": "bbb" },
{"A": "Sienet","B": "Pötsisienet","C": "Buwchfawromyces", "D": "aaa", "E": "bbb" },
{"A": "Sienet","B": "Itusienet","C": "Physodermatomycetes", "D": "aaa", "E": "bbb" },
{"A": "Sienet","B": "Itusienet","C": "Blastocladiomycetes", "D": "aaa", "E": "bbb" },
],
"transform": [
{
"type": "treeify",
"groupby": ["A","B","C","D"]
},
{
"type": "hierarchy",
"mode": "cluster",
"nodesize": [20,100]
},
{
"type": "formula",
"field": "align",
"expr": "'right'"
},
{
"type": "formula",
"field": "offset",
"expr": "-10"
}
]
}
],
"marks": [
{
"type": "path",
"from": {
"data": "tree",
"transform": [
{"type": "filter","test": "datum.parent"},
{
"type": "linkpath",
"sourceX": "parent.layout_y",
"sourceY": "parent.layout_x",
"targetX": "layout_y",
"targetY": "layout_x",
"shape": "cornerX"
}
]
},
"properties": {
"enter": {
"path": {"field": "layout_path"},
"strokeWidth": {"value": 2},
"stroke": {"value": "#000000"}
}
}
},
{
"type": "text",
"from": {
"data": "tree",
"transform": [
{
"type": "formula",
"field": "ff_node_label",
"expr": "if(datum.layout_depth == 0, 'Kantasienet', if(datum.layout_depth == 1, datum.A, if(datum.layout_depth == 2, datum.B, if(datum.layout_depth == 3, datum.C, if(datum.layout_depth == 4, datum.D, if(datum.layout_depth == 5, datum.E , ))))))"
}
]
},
"properties": {
"enter": {
"x": {"field": "layout_y"},
"dx": {"field": "offset"},
"y": {"field": "layout_x"},
"dy": {"value": -8},
"font": {"value": "Arial"},
"fontSize": {"value": 12},
"align": {"field": "align"},
"baseline": {"value": "middle"},
"fill": {"value": "#0000ff"},
"text": {"field": "ff_node_label"}
}
}
}
]
} </graph>
Kotelosienet
<graph> {
"width": 1024,
"height": 150,
"background": "#ffffff",
"data": [
{
"name": "tree",
"values": [
{"A": "Sienet","B": "Kotelosienet","C": "Rihmastolliset kotelosienet" },
{"A": "Sienet","B": "Kotelosienet","C": "Aitohiivat" },
{"A": "Sienet","B": "Kotelosienet","C": "Taphrinomycotina" },
{"A": "Sienet","B": "Kantasienet","C": "Avokantaiset" },
{"A": "Sienet","B": "Kantasienet","C": "Ruostesienet" },
{"A": "Sienet","B": "Kantasienet","C": "Nokisienet" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Chytridiomycetes" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Mesochytriomycetes" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Monoblepharidomycetes" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Hyaloraphidiomycetes" },
{"A": "Sienet","B": "Piiskasiimasienet","C": "Sanchytriomycetes" },
{"A": "Sienet","B": "Pötsisienet","C": "Anaeromyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Buwchfawromyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Caecomyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Cyllamyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Neocallimastix" },
{"A": "Sienet","B": "Pötsisienet","C": "Oontomyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Orpinomyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Pecoramyces" },
{"A": "Sienet","B": "Pötsisienet","C": "Piromyces" },
{"A": "Sienet","B": "Itusienet","C": "Physodermatomycetes" },
{"A": "Sienet","B": "Itusienet","C": "Blastocladiomycetes" },
{"A": "Sienet","B": "Harppuunasienet","C": "" },
],
"transform": [
{
"type": "treeify",
"groupby": ["A","B"]
},
{
"type": "hierarchy",
"mode": "cluster",
"nodesize": [20,100]
},
{
"type": "formula",
"field": "align",
"expr": "'right'"
},
{
"type": "formula",
"field": "offset",
"expr": "-10"
}
]
}
],
"marks": [
{
"type": "path",
"from": {
"data": "tree",
"transform": [
{"type": "filter","test": "datum.parent"},
{
"type": "linkpath",
"sourceX": "parent.layout_y",
"sourceY": "parent.layout_x",
"targetX": "layout_y",
"targetY": "layout_x",
"shape": "cornerX"
}
]
},
"properties": {
"enter": {
"path": {"field": "layout_path"},
"strokeWidth": {"value": 2},
"stroke": {"value": "#000000"}
}
}
},
{
"type": "text",
"from": {
"data": "tree",
"transform": [
{
"type": "formula",
"field": "ff_node_label",
"expr": "if(datum.layout_depth == 0, 'Eliökunta', if(datum.layout_depth == 1, datum.A, if(datum.layout_depth == 2, datum.B, if(datum.layout_depth == 3, datum.C, ))))"
}
]
},
"properties": {
"enter": {
"x": {"field": "layout_y"},
"dx": {"field": "offset"},
"y": {"field": "layout_x"},
"dy": {"value": -8},
"font": {"value": "Arial"},
"fontSize": {"value": 12},
"align": {"field": "align"},
"baseline": {"value": "middle"},
"fill": {"value": "#0000ff"},
"text": {"field": "ff_node_label"}
}
}
}
]
} </graph>
